FSU oceanographers present new conceptual framework to answer age-old question: What happens to carbon as it sinks through the ocean?

Mon, 11/24/25
Heather Forrer
Heather Forrer, a Ph.D. graduate from the FSU Department of Earth, Ocean and Atmospheric Science. (Courtesy of Heather Forrer)

糖心vlog oceanographers have discovered a significant connection between small-scale microbial processes and ecosystem-wide dynamics, offering new insights into the mechanisms driving marine carbon storage.

Heather Forrer, a Ph.D. graduate from FSU鈥檚  (EOAS), led new research spanning multiple ocean regions that found upper ocean ecosystem conditions, such as nutrient availability and microbial interactions, play a major role in shaping the composition of carbon-rich particles sinking into the deep ocean. The particles, surprisingly, continued to carry the imprint of surface ecosystem dynamics even at great depths, shaping how carbon is ultimately sequestered. The research was published today in the . 

Because the ocean is Earth鈥檚 largest active carbon sink, pulling carbon dioxide from the atmosphere and storing it for long periods, understanding these processes has important implications for the global carbon cycle.  

鈥淭his work was central to my dissertation, representing years of experimentation, perseverance and collaboration,鈥 said Forrer, who earned a doctorate in oceanography from FSU last year. 鈥淚t feels like a huge personal milestone and great contribution to the broader field, offering a new approach to longstanding, globally relevant questions.鈥

Collecting water samples
CTD-Niskin rosette devices, which measure conductivity, temperature and depth, were deployed to collect water samples in the Indian Ocean. Photo by Heather Forrer.

On land, plants absorb carbon dioxide, converting it into organic matter and oxygen through photosynthesis. This same process is performed by tiny, ocean-dwelling plants called phytoplankton, which establish the base of the complex marine food web. The organic matter produced in this system ranges from microscopic particles unable to be seen with the naked eye to particles as thick as a nickel.

鈥淪ome of these particles sink from the sunlit surface into the ocean鈥檚 depths, effectively removing carbon from the atmosphere and storing it for decades to millennia,鈥 Forrer said. 鈥淗owever, as this organic matter descends, it undergoes complex transformations that have long puzzled scientists. Understanding these changes is critical, as the rate and extent to which they occur determine how long this carbon is locked away.鈥 

These transformations are driven by microorganisms, or microbes, which influence organic matter鈥檚 sinking rate by reshaping or degrading the particles. The research team collected sinking particles from the Gulf, California Current Ecosystem and tropical Indian Ocean to examine molecular changes as they descend into the deep ocean.

MAGLAB RESEARCH
鈥淗eather is an incredibly driven and intelligent early career scientist,鈥 said Michael Stukel, EOAS chair and study co-author. 鈥淭his publication is crucial to understanding the biological carbon pump and places our department at the vanguard of the field. It also highlights the incredible science that can be done in collaboration with other FSU departments and centers, such as the FSU-headquartered , which allowed us to characterize organic matter in sinking particles at a previously unseen level.鈥 

Using the National MagLab鈥檚 advanced ultrahigh-resolution mass spectrometer 鈥 which harnesses a powerful magnetic field to identify molecules with extreme precision 鈥 the researchers were able to, for the first time, directly compare the molecular composition of sinking particles collected in different ocean regions at different depths. They found that in nutrient-rich regions like California鈥檚 upwelling region, where particles are produced and sink quickly, more 鈥渇resh鈥 carbon reached greater depths with very little molecular change, suggesting a strong carbon sequestration pathway. By contrast, nutrient-poor regions like the Gulf feature slower-sinking particles, which are more extensively processed by microbes, showing greater molecular changes since formation and contributing less effectively to carbon storage.  

鈥淭hese topics, as foreign as they may seem, are intimately connected to our everyday lives,鈥 Forrer said. 鈥淭he air we breathe and Earth鈥檚 climate are largely controlled by the ocean and the processes investigated in this publication. By better understanding these fine-scale processes, we can gain a clearer picture of how the ocean functions today and more accurately predict how resilient these marine carbon storage pathways are in a warming world.鈥 

National High Field Magnetic Laboratory
Heather Forrer, a Ph.D. graduate from the FSU Department of Earth, Ocean and Atmospheric Science, and her research team employed the FSU-headquartered National High Field Magnetic Laboratory鈥檚 advanced ultrahigh-resolution mass spectrometer, or 21T FT-ICR MS, to analyze sinking particles at the molecular level. Photo by Heather Forrer.

COLLABORATION AND SUPPORT
In addition to Stukel, co-authors include FSU professor of oceanography and environmental science Robert Spencer; Amy Holt, an FSU alumna and postdoctoral fellow at the University of Alaska Southeast; Sven Kranz, an associate professor of BioSciences at Rice University; Amy McKenna, an analytical chemist with the National MagLab鈥檚 Ion Cyclotron Resonance Facility and Colorado State University; and Huan Chen, a National MagLab research faculty member. 

This research was supported by the National Science Foundation-funded California Current Ecosystem Long-Term Ecological Research (CCE LTER) and Bluefin Larvae in Oligotrophic Ocean Foodwebs, Investigation of Nitrogen to Zooplankton (BLOOFINZ-IO) projects and the National Oceanic and Atmospheric Administration鈥檚 RESTORE Science Program, named for the Resources and Ecosystems Sustainability, Tourist Opportunities, and Revived Economies of the Gulf States Act and established to support the Gulf ecosystem鈥檚 long-term sustainability. 

To learn more about research conducted in FSU鈥檚 Department of Earth, Ocean and Atmospheric Science, visit .